BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035F01SP1|AL430079
(963 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig263 1461 0.0
>3x_Contig263
Length = 1127
Score = 1461 bits (736), Expect = 0.0
Identities = 741/744 (99%)
Strand = Plus / Plus
Query: 215 tgagagaggctgcagaggcagaaagaagagctttattcaatccggtactggaccagaagg 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 tgagagaggctgcagaggcagaaagaagagctttattcaatccggtactggaccagaagg 63
Query: 275 tgaaagctggtgtggatcctaaaactgtgctctgtgcgttattcaagattggtaattgtw 334
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 tgaaagctggtgtggatcctaaaactgtgctctgtgcgttattcaagattggtaattgta 123
Query: 335 acaaaggtgcacgctgtaagttctcgcatgatatgaatgtcggacgtagagtggagaaga 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 acaaaggtgcacgctgtaagttctcgcatgatatgaatgtcggacgtagagtggagaaga 183
Query: 395 gagatttgtatcaggacacaagaagtgaaaaggaagaagatactatggacaattgggatg 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gagatttgtatcaggacacaagaagtgaaaaggaagaagatactatggacaattgggatg 243
Query: 455 aagctaagttgagaagtgtgattttgtccaagcatggtaatcctagaacaaccactgaaa 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 aagctaagttgagaagtgtgattttgtccaagcatggtaatcctagaacaaccactgaaa 303
Query: 515 aggtttgtwaatatttcatcgaagctgtcgaaaacggtaagtacgggtggttttggattt 574
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aggtttgtaaatatttcatcgaagctgtcgaaaacggtaagtacgggtggttttggattt 363
Query: 575 gtcctaacggcggtgataaatgtatgttcaagcactccttaccggaaggattcgtattaa 634
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 364 gtcctaacggcggtgataaatgtatgtacaagcactccttaccggaaggattcgtattaa 423
Query: 635 agactaaagaacagaagaggttagaaatggaggcctttgagaagaagccaaagatcactt 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 agactaaagaacagaagaggttagaaatggaggcctttgagaagaagccaaagatcactt 483
Query: 695 tggaagaattcatcgaaaccgaaagggaacgcttggataagagaaatttgacaccaatta 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tggaagaattcatcgaaaccgaaagggaacgcttggataagagaaatttgacaccaatta 543
Query: 755 caatggacaactttgctgaatggaagaagaaccacagaattgaaaggctcaatctagaaa 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 caatggacaactttgctgaatggaagaagaaccacagaattgaaaggctcaatctagaaa 603
Query: 815 aagagaataacttgaagaaaaaacctagtggacgtgaagtcgtgctgaagaaatatacag 874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 aagagaataacttgaagaaaaaacctagtggacgtgaagtcgtgctgaagaaatatacag 663
Query: 875 aagacaagagatttgatctcgtcgatgaaactgattccacgaacggttcagcgtgggatt 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 aagacaagagatttgatctcgtcgatgaaactgattccacgaacggttcagcgtgggatt 723
Query: 935 tgaccgagttcacaaaagcattaa 958
||||||||||||||||||||||||
Sbjct: 724 tgaccgagttcacaaaagcattaa 747
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9209
Number of Sequences: 1807
Number of extensions: 9209
Number of successful extensions: 85
Number of sequences better than 1.0e-20: 1
length of query: 963
length of database: 10,358,551
effective HSP length: 16
effective length of query: 947
effective length of database: 10,329,639
effective search space: 9782168133
effective search space used: 9782168133
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)